graph_parallel/test/distributed_strong_components_test.cpp
2013-08-12 18:14:58 +00:00

176 lines
5.3 KiB
C++

// Copyright (C) 2004-2008 The Trustees of Indiana University.
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// Authors: Nick Edmonds
// Douglas Gregor
// Andrew Lumsdaine
// SCC won't work with CSR currently due to the way the reverse graph
// is constructed in the SCC algorithm
#include <boost/graph/use_mpi.hpp>
// #define CSR
#ifdef CSR
# include <boost/graph/distributed/compressed_sparse_row_graph.hpp>
#else
# include <boost/graph/distributed/adjacency_list.hpp>
#endif
#include <boost/config.hpp>
#include <boost/throw_exception.hpp>
#include <boost/graph/strong_components.hpp>
#include <boost/graph/random.hpp>
#include <boost/property_map/parallel/distributed_property_map.hpp>
#include <boost/graph/distributed/mpi_process_group.hpp>
#include <boost/graph/parallel/distribution.hpp>
#include <boost/graph/erdos_renyi_generator.hpp>
#include <boost/test/minimal.hpp>
#include <boost/graph/distributed/graphviz.hpp>
#include <iostream>
#include <cstdlib>
#include <iomanip>
#include <boost/random.hpp>
#include <boost/test/minimal.hpp>
#ifdef BOOST_NO_EXCEPTIONS
void
boost::throw_exception(std::exception const& ex)
{
std::cout << ex.what() << std::endl;
abort();
}
#endif
typedef double time_type;
inline time_type get_time()
{
return MPI_Wtime();
}
std::string print_time(time_type t)
{
std::ostringstream out;
out << std::setiosflags(std::ios::fixed) << std::setprecision(2) << t;
return out.str();
}
using namespace boost;
using boost::graph::distributed::mpi_process_group;
void
test_distributed_strong_components(int n, double _p, bool verify, bool emit_dot_file, int seed)
{
#ifdef CSR
typedef compressed_sparse_row_graph<directedS, no_property, no_property, no_property,
distributedS<mpi_process_group> > Graph;
#else
typedef adjacency_list<listS,
distributedS<mpi_process_group, vecS>,
bidirectionalS > Graph;
#endif
minstd_rand gen;
gen.seed(seed);
mpi_process_group pg;
parallel::variant_distribution<mpi_process_group> distrib
= parallel::block(pg, n);
#ifdef CSR
Graph g(sorted_erdos_renyi_iterator<minstd_rand, Graph>(gen, n, _p/2),
sorted_erdos_renyi_iterator<minstd_rand, Graph>(),
n, pg, distrib);
#else
Graph g(erdos_renyi_iterator<minstd_rand, Graph>(gen, n, _p/2),
erdos_renyi_iterator<minstd_rand, Graph>(),
n, pg, distrib);
#endif
synchronize(g);
std::vector<int> local_components_vec(num_vertices(g));
typedef iterator_property_map<std::vector<int>::iterator, property_map<Graph, vertex_index_t>::type> ComponentMap;
ComponentMap component(local_components_vec.begin(), get(vertex_index, g));
int num_components = 0;
time_type start = get_time();
num_components = strong_components(g, component);
time_type end = get_time();
if (process_id(g.process_group()) == 0)
std::cerr << "Erdos-Reyni graph:\n" << n << " Vertices " << _p << " Edge probability "
<< num_processes(pg) << " Processors\n"
<< "Strong Components time = " << print_time(end - start) << " seconds.\n"
<< num_components << " components identified\n";
if ( verify )
{
if ( process_id(g.process_group()) == 0 )
{
for (int i = 0; i < n; ++i)
get(component, vertex(i, g));
synchronize(component);
// Check against the sequential version
typedef adjacency_list<listS, vecS, directedS> Graph2;
gen.seed(seed);
Graph2 g2(erdos_renyi_iterator<minstd_rand, Graph>(gen, n, _p/2),
erdos_renyi_iterator<minstd_rand, Graph>(),
n);
std::vector<int> component2(n);
int seq_num_components = strong_components(g2, make_iterator_property_map(component2.begin(), get(vertex_index, g2)));
assert(num_components == seq_num_components);
// Make sure components and component2 match
std::map<int, int> c2c;
int i;
for ( i = 0; i < n; i++ )
if ( c2c.find( get(component, vertex(i, g)) ) == c2c.end() )
c2c[get(component, vertex(i, g))] = component2[i];
else
if ( c2c[get(component, vertex(i, g))] != component2[i] )
break;
if ( i < n )
std::cerr << "Unable to verify SCC result...\n";
else
std::cerr << "Passed verification... " << seq_num_components << " strong components\n";
}
else
{
synchronize(component);
}
if ( emit_dot_file )
write_graphviz("scc.dot", g, paint_by_number(component));
}
}
int test_main(int argc, char* argv[])
{
mpi::environment env(argc, argv);
if (argc == 1)
test_distributed_strong_components(10000, 0.0005, true, false, 1);
else if ( argc < 5 )
std::cerr << "usage: test_distributed_strong_components <int num_vertices> <double p> <bool verify?> <bool emit_dotfile?> [seed]\n";
else
test_distributed_strong_components
(atoi(argv[1]), atof(argv[2]),
argv[3]==std::string("true"), argv[4]==std::string("true"),
argc == 5? 1 : atoi(argv[5]));
return 0;
}